To certain extent, the express and local train mode of the municipality rail transit is conducive to improving passenger service level and the efficiency of municipality rail transit and reducing enterprises’ costs, but there is a multi-objective problem for determining the operation scheme with the express and local train mode. This paper constructed a comprehensive evaluation system of the operating schemes from the perspective of passengers and enterprises, and designed a comprehensive evaluation model for the operating scheme’s priority degree. The principle of extenics was used to establish the matter element set of the operating scheme, and the dynamic measurement conditions of each evaluation index were given; What’s more，the combined weight method was used to determine the comprehensive weight of each evaluation index; then the degree of compliance of each scheme was olesoribed according to the calculated correlation degree; finally, the optimal scheme suitable for the initial, medium term was given based on the results of priority degree.